> ## Documentation Index
> Fetch the complete documentation index at: https://docs.apigene.ai/llms.txt
> Use this file to discover all available pages before exploring further.

# User Guide

> Learn how to use Apigene Copilot effectively

## Welcome to Apigene Copilot

Apigene Copilot is an AI-powered platform that enables you to interact with APIs and services using natural language. This guide will help you get started and make the most of all features.

<Frame>
  <img src="https://mintcdn.com/apigene/0hgpHZPNnLa7OGmd/images/product/app-menu.png?fit=max&auto=format&n=0hgpHZPNnLa7OGmd&q=85&s=beed9a07a6044670108c052e95480c8d" alt="Apigene application menu with navigation to product areas" style={{ borderRadius: '0.5rem' }} width="1600" height="900" data-path="images/product/app-menu.png" />
</Frame>

## What You'll Learn

This user guide covers everything you need to know to effectively use Apigene Copilot:

### Getting Started

Learn the fundamentals to start using Apigene:

<CardGroup cols={2}>
  <Card title="Copilot" icon="message-circle" href="/user-guide/copilot">
    Start having AI-powered conversations with your applications
  </Card>

  <Card title="Agent Builder" icon="wrench" href="/user-guide/agent-builder">
    Create and configure agents through a guided conversational workflow
  </Card>

  <Card title="Applications" icon="grid" href="/user-guide/applications">
    Install and configure your first API integration
  </Card>
</CardGroup>

### Core Features

Master the key features that make Apigene powerful:

<CardGroup cols={3}>
  <Card title="Agents" icon="robot" href="/user-guide/agents">
    Create specialized AI assistants for your workflows
  </Card>

  <Card title="Skills" icon="lightbulb" href="/user-guide/skills">
    Reusable instruction libraries for consistent agent behavior
  </Card>

  <Card title="Context" icon="database" href="/user-guide/context">
    Manage reusable information for consistent results
  </Card>

  <Card title="Chat History" icon="messages" href="/user-guide/chat-history">
    Organize and share your conversations
  </Card>
</CardGroup>

### Integrations

Connect external tools and AI assistants:

<CardGroup cols={2}>
  <Card title="Native MCP Servers" icon="plug" href="/user-guide/mcp-servers">
    Install official, registry, or custom MCP servers and attach them to agents
  </Card>

  <Card title="MCP Gateway" icon="server" href="/user-guide/mcp-gateway/mcp-gateway-overview">
    Connect AI assistants like Claude Desktop and Cline to Apigene using the Model Context Protocol
  </Card>

  <Card title="MCP Apps" icon="layout-template" href="/user-guide/mcp-apps">
    Build UI templates for rich MCP App and generative results
  </Card>
</CardGroup>

### Monitoring & Management

Track usage and manage your workspace:

<CardGroup cols={2}>
  <Card title="Actions" icon="bolt" href="/user-guide/actions">
    Monitor all API calls and troubleshoot issues
  </Card>

  <Card title="Dashboard" icon="chart-line" href="/user-guide/dashboard">
    View analytics and usage insights
  </Card>

  <Card title="Insights" icon="chart-mixed" href="/user-guide/insights">
    Per-agent performance, latency, and usage analytics
  </Card>

  <Card title="Audit Logs" icon="shield-check" href="/user-guide/audit">
    Track system changes and security events
  </Card>

  <Card title="Settings" icon="cog" href="/user-guide/settings">
    Configure your workspace preferences
  </Card>
</CardGroup>

## Quick Navigation

### New to Apigene?

If you're just getting started:

1. **[Install Applications](/user-guide/applications)** - Add your first API integration
2. **[Configure Security](/user-guide/applications#security-configuration)** - Set up authentication
3. **[Try Copilot](/user-guide/copilot)** - Start your first conversation
4. **[Create an Agent](/user-guide/agents)** - Build your first specialized assistant

### Common Tasks

Jump to frequently accessed guides:

* **[How to use Copilot](/user-guide/copilot)** - AI conversations with applications
* **[Installing new applications](/user-guide/applications#installing-applications)** - Add integrations
* **[Creating agents](/user-guide/agents#creating-an-agent)** - Build custom assistants
* **[Adding context](/user-guide/context#creating-context-items)** - Manage reusable data
* **[Sharing conversations](/user-guide/chat-history#chat-sharing)** - Collaborate with team
* **[Debugging actions](/user-guide/actions#troubleshooting)** - Fix API call issues
* **[Viewing analytics](/user-guide/dashboard)** - Monitor usage patterns
* **[Connecting MCP clients](/user-guide/mcp-gateway/mcp-gateway-overview)** - Integrate AI assistants

## How to Use This Guide

Each section of this guide is designed to be:

**Comprehensive**

* Complete coverage of each feature
* Step-by-step instructions
* Real-world examples

**Practical**

* Use cases and scenarios
* Best practices
* Troubleshooting tips

**Easy to Navigate**

* Searchable content
* Cross-referenced topics
* Clear section headings

## Getting Help

### Search the Docs

Use the search bar (⌘K) to quickly find what you need.

### In-Product Help

Look for help icons and tooltips throughout the Apigene interface.

### Contact Support

Reach out to our team at [support@apigene.ai](mailto:support@apigene.ai) for assistance.

### API Documentation

For programmatic integration, see our [API Reference](/api-reference).

## What's Next?

<CardGroup cols={2}>
  <Card title="Start with Copilot" icon="play" href="/user-guide/copilot">
    Learn how to interact with applications using AI
  </Card>

  <Card title="Install Applications" icon="download" href="/user-guide/applications">
    Add your first API integration
  </Card>

  <Card title="View Examples" icon="lightbulb" href="/user-guide/copilot#your-first-query">
    See example queries and use cases
  </Card>

  <Card title="Best Practices" icon="star" href="/user-guide/copilot#best-practices">
    Learn tips for effective usage
  </Card>

  <Card title="MCP Gateway" icon="server" href="/user-guide/mcp-gateway/mcp-gateway-overview">
    Connect external AI assistants to Apigene
  </Card>
</CardGroup>